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Recent Publications

Submitted  and accpted (2010)

  1. Aly A., Hussein E.M., Omar M.R., Abd-Elsalam K.A. (2010) Effect of Amino Acid Content on the Level of Cottonseed Colonization by Mycoflora. Accepted for publication in International of Agricultural and Biology.

2.       Aly A., Hussein E.M., Omar M.R., El-Abbasi I,  Abd-Elsalam K.A. (2010) Effect of fatty acid content on the level of cottonseed colonization by mycoflora. Submitted to Biological Letters.

  1. Wulandari, N.F., To-anun, C., Crous, P.W, Cai, L., Abd-Elsalam K.A. and Hyde, K.D. (2010) Guignardia/Phyllosticta species on banana. Submitted to Sydowia
  1. Moslem M.A., Mashraqi, A. Abd-Elsalam K.A., Bahkali A.H. and Elnagaer  M.A. (2010)  PCR-based methods for detection of ochratoxigenic Aspergillus species isolated from coffee bean. Accepted for publication in Genetics and Molecular Research. IF: 0.844.
  1. Abd-Elsalam K.A., Almohimeed I., Moslem M.A. and Bahkali A.H. (2010) M13-microsatellite PCR and rDNA sequence markers for Identification of Trichoderma species in soil from Saudi Arabia. Accepted for publication in Genetics and Molecular Research. IF: 0.844.
  1. Abd-Elsalam K.A., Bahkali A. H., Moslem M.A., Pierre J. G. M. de Wit (2010) An efficient method for DNA extraction from Cladosporioid fungi. Accepted for publication in Genetics and Molecular Research. IF: 0.844.
  1. Phoulivong S., Cai L., Chen H, McKenzie E.H.C., Abd-Elsalam K.A., Chukeatirote E., Hyde K.D. (2010) Colletotrichum gloeosporioides is not a common pathogen on tropical fruits. Fungal Diversity. doi:10.1007/s13225-010-0046-0. IF: 3.803.
  1. Wikee, S., Cai, L., Pairin, B., McKenzie, E.H.C., Chukeatirote, E., Thi H.N., Bahkali, A.H., Moslem, M.A., Abd-Elsalam, K.A., and Hyde, K.D (2010) Colletotrichum species from Jasmine (Jasminum sambac) Fungal Diversity. DOI: 10.1007/s13225-010-0049-x IF: 3.803.
  1. Yassin M. A., Elsmawaty A., Bahkali A.H., Abd-Elsalam K.A., Moslem M.A. and K. Hyde (2010) Mycotoxin-producing fungi occurring in sorghum grains from Saudi Arabia. Fungal Diversity.  44: 45-52. IF: 3.803.
  1. Abd-Elsalam K.A., Yassin M.A., Moslem M.A. and Bahkali A.H. Pierre J.G.M. de Wit  McKenzie  E.H.C., Stephenson S.L. and Cai L., Hyde K.D. (2010) Culture collections are becoming the herbaria for fungal pathogens. DOI 10.1007/s13225-010-0063-z IF: 3.803.
  1. Abd-Elsalam K.A., Roshdy S., Amin O.E., Rabani M. Y. (2010). First morphogenetic identification of Colletotrichum musae from imported Bananas in Saudi Arabia. Accepted for publication in Genetics and Molecular Research. IF: 0.844.

12.    Abd-Elsalam K.A., Bahkali A.H., Al-Khedhairy A. A. and Moslem M.A. (2010) Freeze- and thaw-based procedures for extraction DNA from activated sludge. Accpeted for publication in Polish Journal of Environmental Studies. IF: 0.963.

13.    Yassin M.A., Elsmawaty A.M.A., Bahkali A.H. and Abd-Elsalam K.A. (2010) Fungal biota and occurrence of aflatoxigenic Aspergillus associated with postharvest corn grains.  Submitted to  Journal of Food Safety. IF: 0.646

2010

  1. Aly A.A., Hussein E. M., Omar M.R., Abd-Elsalam K.A. (2010) Use of amino acid composition of seed to quantify resistance of cotton genotypes to Fusarium wilt disease. Allelpathy Journal 26: 84-92. IF: 0.793
  1. Phengsintham P., Chukeatirote E., Abd-Elsalam K.A., Hyde K.D. and Braun U. (2010) Cercospora and allied genera from Laos 2. Cryptogamie Mycologie 31: 161-181. IF: 0.552
  1. Abd-Elsalam K.A., Bahkali H. A., Verreet J.A and Moslem M.A. (2010) Microsatellite-primed PCR as a tool for discrimination of Fusarium species. Accepted for publication in Journal of Food Safety. IF: 0. 646
  1. Moslem M.A., Abd-Elsalam K.A., Bahkali A.H., and Yassin M.A. (2010) First morpho-molecular identification of Penicillium griseofulvum and P. aurantiogriseum toxicogenic isolates associated with blue mold on apple. Food-Borne Pathogen and Disease 7: 857-861. IF:2.442
  1. Abd-Elsalam K.A. (2010). Reusing of agarose in molecular plant pathology laboratories. In: Molecular biology of  Plant Pathogens (Eds. L.V. Gangawane and V.C. Khilare, Publ. Daya Publishing House, Delhi, India), pp.123 - 130.
  1. Abd-Elsalam K. A. (2010) Genetical and Biological Control of Cotton Ashy Stem Caused by Macrophomina Phaseolina in Outdoor Pot Experiment. Saudi Journal of Biological Science. 17: 147-152.
  1. Bahkali A.H., Abd-Elsalam K.A., Moslem M.A. and Yassin M.A. (2010) Microsatellite-primed pcr characterization of hydrocarbon degrading fungi isolated from two oily seeds. Fresenius Environmental Bulletin. 19: 751-756. IF: 0.463
  1. Abd-Elsalam K.A., Aly A.A. and Omar M.R. (2010) First Report of Rhizoctonia solani AG-7 on Cotton in Egypt. Journal of Phytopathology 158: 307-309. IF: 0.983

2009

  1. Abd-Elsalam K. A. (2009) First report of Fusarium thapsinum on imported banana fruits into Saudi Arabia. Pest Technology 3:25-27.

2.       Abd-Elsalam K.A., Guo J-R., Moslem M. A., Bahkali A.H and Verreet J-A. (2009) Suitability of intergenic spacer or internal transcribed spacer microsatellite-primed PCR for the identification of phytopathogenic fungi. Journal of Rapid Automation Methods and Microbiology 17: 383–397. IF: 0. 659

3.       Abd-Elsalam K. A., R. Omar, A. Asran-Amal and A. A. Aly (2009) Differential interaction between cotton genotypes and isolates of Fusarium oxysporum f. sp. vasinfectum. Archives of Phytopathology and Plant Protection 42:464-473. ISI- Master Journal

4.       Abd-Elsalam K.A., Moslem M. A., Bahkali A.H (2009).First Morpho-Molecular Identification of Rhizoctonia solani AG-7 from Potato tuber-borne sclerotium in Saudi Arabia. African Journal of Microbiological Research. 3: 952-956. IF: 0.446

2008

  1. Abd-Elsalam K.A., Asran-Amal A., Guo J.R. and Verreet J.-A. (2008) Molecular detection and diagnostic of Fusarium spp. isolated from cotton. Journal Plant Pathology 90: S3.12. IF: 0.974.

2.       Bahkali A. H., Abd-Elsalam K.A., Moslem M.A. and Al-Khedhairy A. A (2008) In-house protocol for isolation of restrictable and amplifiable genomic DNA from plants, fungi and bacteria. Genes, Genomes and Genomics. 2: 77-88.

3.       Abd-Elsalam K. A., Guo J-R., and Vereet J.-A. (2008) In silico tools to study phytofungi. In: Current Advances in Molecular Mycology. Ed. By Youssuf Gherbawy, Robert Mach and Mahendra Rai,  Nova Science Publishers, New York, USA. (Book)

4.       Abd-Elsalam K.A., Bahkali H. A., Al-Khedhairy A. A. and Verreet H.-A. (2008) Development of a conventional and Lightcycler PCR assay for detection of Fusarium solani. Genes, Genomes and Genomics. 2: 63-67.

5.       El-Samawaty A., Asran-Amal A., Omar M., Abd-Elsalam K. A. (2008) Anastomosis groups, pathogenicity, and cellulase production of Rhizoctonia solani from. Pest Technology 2: 117-124.

6.       Aly A.A., Abdel-Sattar M.A., Abd-Elsalam K.A., Omar M.R.  (2008) Effect of Physical and chemical edaphic factors on susceptibility of cotton seedlings to Macrophomina phaseolina. Pest Technology 2:20-23.

2007

1.       Gullino M.L., Suffert F., Dehne H., Thomas J., Barker I., Gamliel A., Bonifert M., Stack J., Fletcher J., Abd-Elsalam K. (2007). Crop and food biosecurity: first results of European research. Phytopathology 97:S44. IF: 2.337.

2.       Abd-Elsalam K. A., A. Asran-Amal, A. El-Samawaty (2007) Isolation of high quality DNA from cotton and its fungal pathogens. Journal of Plant Diseases and Protection. 114: 113-116. IF: 0.566.

3.       Omar M. R., K. A. Abd-Elsalam, A. A. Aly, A.M.A. El-Samawaty and J.-A Verreet (2007) Diversity of Macrophomina phaseolina from cotton in Egypt: Analysis of pathogenicity, chlorate phenotypes, and molecular characterization. Journal of Plant Diseases and Protection 114:196-204. IF: 0.566.

4.       Aly A A., Abdel-Sattar M A., Omar M  R.,  Abd-Elsalam K.A. (2007) Differential antagonism of Trichoderma sp. against Macrophomina phaseolina. Journal of Plant Protection Research. 47:91-102.

5.       Abd-Elsalam K. A., Omar M. R., A.M.A. El-Samawaty and A. A. Aly, (2007) Response of commercial cotton cultivars to Fusarium solani. The Plant Pathology Journal. 23:62-69.

6.       Aly A.A.,  Abdel-Sattar M.A., Omar M.R.  Abd-Elsalam K.A. (2007) Differential interaction between isolates of Macrophomina phaseolina and Egyptian cotton cultivars. Pest Technology 1: 127-132.

2006
1.    El-Naggar M.A. and Abd-Elsalam K.A. (2006) Detoxification of Fusarium moniliforme 
mycotoxins:  An Overview. Chapter In: Biotechnology for Food, Agriculture and 
Environment, Volume One by D.Thangadurai, W.Tang and A. Bennett. Regency 
Publishers: New Delhi, 54-68. (Book)

1.    Abd-Elsalam K. A., A. A. Asran-Amal, M. R. Omar and A. A. Aly (2006) Frequency and diversity of Fusarium spp. colonizing Roots of Egyptian cottons. Archives of Phytopathology and Plant Protection 39: 165-177. ISI- Master Journal FROM PH.D THESIS

2.     Abd-Elsalam K. A., , F. Schnieder, A. A. Asran-Amal, Q. Migheli and J-A. Verreet (2006) Molecular detection of Fusarium oxysporum f. sp. vasinfectum in cotton roots by PCR and real- time PCR assay. Journal of Plant Diseases and Protection, 113, 14-19. IF: 0.566.

2005

1.       Guo J-R., F. Schnieder, K. A. Abd-Elsalam, J-A. Verreet (2005) Rapid and efficient extraction of genomic DNA from different phytopathogenic fungi. Biotechnology Letters 27: 3-6. IF: 1.222

2.       Abd-Elsalam K. A., (2005) Molecular tools for quick and reliable diagnosis of pathogenic Fusaria. Chapter In: T. Pullaiah, D. Thangadurai, and M.A.A.P. Carvalho. Genetic Resources and Biotechnology. Regency Publishers: New Delhi, 250-266. (Book)

3.       Asran-Amel, A,. K. A. Abd-Elsalam, M. R. Omar, A. A. Aly (2005) Antagonistic potential of Trichoderma spp.  against Rhizoctonia solani and Use of  M13 Minisatellite-primed PCR to evaluate of the antagonist genetic variation. Journal of Plant Diseases and Protection. 112, 550–561. IF: 0.566.

2004

1

Abd-Elsalam, K. A; M. S; Khalil, M.S; Schnieder F., Verreet J-A. (2004) Quantitative detection of Fusarium oxysporum f. sp. vasinfectum in soil by Fov-targeted real-time PCR assays. 54 Deutsche Pflanzenschutztagung, in Hamburg, Germany, 20-32, September, 2004. Abstract No. 153.

2

Abd-Elsalam K. A. , J-R. Guo, F. Schnieder, A. A. Asran-Amal, and J-A. Verreet (2004) Comparative assessment of genotyping methods for study genetic diversity of Fusarium oxysporum isolates. Polish Journal of Microbiology 53: 167-174 .

3

Abd-Elsalam K. A., M. R. Omar, Q. Migheli and H. I. Nirenberg (2004) Genetic characterization of Fusarium oxysporum f. sp. vasinfectum isolates by random amplification of polymorphic DNA (RAPD) and amplified fragment length polymorphism (AFLP). Journal of Plant Diseases and Protection 111:534-544.

4

Balmas V., Scherm B., Demontis M.A., Fiori S., Manca A., Puggioni G., Ghignone S., Schmoll M., Druzhinina I., Kubicek C.P., Salem A.O.M., Sedra M.H., Abd-Elsalam K.A, Migheli Q. (2004)  Biodiversità e caratterizzazione funzionale di Trichoderma spp. antagonisti. Atti Workshop Biodiversità in Sardegna, December 17, 2004, Pula (CA), Italy (in Italian).

minireview

1

Abd-Elsalam K. A. (2003) Bioinformatic tools and guideline for PCR primer design. African Journal of Biotechnology 2: 91-95.

2

Abd-Elsalam K. A. (2003) Web-based bioinformatic resources for protein and nucleic acids sequence alignment. African Journal of Biotechnology 2: 714-718.

3

Abd-Elsalam K. A. (2003) Non-gel based techniques for plant pathogen genotyping. Acta Microbiologica Polonica 52:329-341.

2003

1

Abd-Elsalam K. A., F. Schnieder, M. S. Khalil, A.A. Aly and J. A. Verreet (2003) Genetic variation at the intra- and interspecific level in Fusarium spp. associated from Egyptian cottons. Journal of Plant diseases and Protection 110: 46-53.

2*

Abdel-Sattar M. A., M. S. Khalil, I. N. Mohmed, K. A. Abd-Elsalam and J. A. Verreet (2003) Molecular phylogeny of Fusarium species by AFLP fingerprint. African Journal of Biotechnology 2: 51-55. FROM PH.D THESIS.

3*

Abd-Elsalam K. A., I. N. Mohmed, M. A. Abdel-Sattar, M. S. Khalil and J. A. Verreet. (2003) PCR identification of Fusarium genus based on nuclear ribosomal-DNA sequence data. African Journal of Biotechnology 2: 82-85. FROM PH.D THESIS.

4

Abd-Elsalam K. A., F. Schnieder, M. S. Khalil, M. A.,Asran-Amal A. and J. A. Verreet (2003) Use of AFLP fingerprinting to analyze genetic variation within and between populations of Fusarium spp. derived from Egyptian cottons. Journal Plant Pathology 82: 99-103. 

5

Abd-Elsalam K. A., F. Schnieder and J. R. Guo (2003) A modified DNA extraction minipreparation protocol for Fusarium isolates. Journal of Rapid Methods and Automation in Microbiology 11: 75-79.

6

Guo J., K. A. Abd-Elsalam, F. Schnieder and J. A. Verreet (2003) A rapid and effective method for total RNA extraction from conidia and mycelia of Septoria tritici. Journal of Rapid Methods and Automation in Microbiology  11:53-59.

7*

Ibrahim .N. Aly,  Abd-Elsalam K. A., M. S. Khalil, and J. A. Verreet (2003) Comparison of multi-locus enzyme and protein gel electrophoresis in the discrimination of five Fusarium species isolated from Egyptian cottons. African Journal of Biotechnology 2: 206–210. FROM PH.D THESIS.

8*

Khalil M. S., M. A. Abdel-Sattar, I. N. Aly, K. A. Abd-Elsalam and J-A. Verreet Genetic affinities of Fusarium spp. and their correlation with origin and pathogenicity. African Journal of Biotechnology 2: 109-113. FROM PH.D THESIS.

9

Abd-Elsalam K. A., F. Schnieder, A. Asran-Amal, M. S. Khalil and J-A. Verreet (2003) Intraspecies genomic groups in Fusarium semitectum and their correlation with origin and morphological characteristics. Journal of Plant Diseases and Protection.110: 409-418.

10*

Abd-Elsalam K. A., F. Schnieder, A. Asran-Amal and J-A. Verreet (2003). Evolution of RAPD, AFLP and ITS-PCR-RFLP analysis for Molecular Typing of Fusarium oxysporum isolates in Egypt. Achen Arbeitskreise Mykologie 21-22 March 2003. FROM PH.D THESIS.

*Research articles published from Ph.D. thesis data.

2002

1

Abd-Elsalam K. A., F. Schnieder and J. A. Verreet (2002) Population analysis of Fusarium spp. Phytomedizin 3: 18-19.

2

Abd-Elsalam K. A., M. S. Khalil, A. A. Aly, and A. Asarn-Amal (2002) Genetic diversity among Fusarium oxysporum f. sp. vasinfectum isolates revealed by UP-PCR and AFLP markers. Phytopathologia Mediterranea 41: 252-258. IF: 0.599.

3

Khalil M. S., A. A. Aly, F. Schnieder and K. A. Abd-Elsalam (2002) Effect of gel matrices on characterization of Fusarium oxysporum and Fusarium oxysporum f. sp. vasinfectum by RAPD analysis. DNA Based Molecular Construction International Workshop, 23-25 May Jena, Germany.

4

Abd-Elsalam K. A., F. Schnieder, J. A. Verreet, M. S. Khalil, M. A. Abdel-Sattar and I. N. Mohmed (2002) Comparison of SDS-PAGE, Isozymes, RAPD and AFLP genetic markers in determining genetic similarity among 46 Fusarium spp. isolates. 53 Deutsche Pflanzenschutztagung, in Bonn, Germany, 16-19 September, 2002. Abstract No. 289.

 

 

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